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VectorBase: A. gambiae
All organisms A. gambiae A. aegypti I. scapularis C. pipiens P. humanus
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HMMER @ VectorBase.org: Build HMMER model »
Directions:
  1. Paste or upload multiple sequence alignment.
  2. Optional: Set additional HMMBUILD parameters.
  3. Submit your HMMBUILD job.
  4. For more information, read the HMMER User's Guide
Sequence Type:
Sequence Type:
HMMBuild Options:
Alginment:
Weighting Algorithm:
Calibrate for HMMSearch:
HMMCalibrate Options:
Random sequence length:
Random seq length mean:
Number of sampled seqs:
Random seq length std. dev:
Random seed:
Input Multiple Sequence Alignment:

Upload a file:

OR
Paste in multiple sequence alignment:

Job Control:
Submit your HMMBUILD job
Retrieve a previously run HMMBUILD job
  •  
VectorBase Last Updated July 11th, 2008
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ND Ensembl IMBB Harvard Imperial College