VectorBase: A. gambiae
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	BLAST @ VectorBase.org: New BLAST » Directions: Click on organism(s) below and then check desired target databases. Paste or upload query sequence. Choose the appropriate type of BLAST based on query and database sequence types. Optional: Set additional BLAST parameters. Submit your BLAST. Available Databases: Click on an organism to see available databases.  KEY:   N: Nucleotide Database   P: Peptide Database   A. gambiae Databases » N: PEST strain Chromosome Arms, AgamP3 assembly N: AgamP3.4 gene build transcripts P: AgamP3.4 gene build peptides N: March 2008 GenBank ESTs N: Mali-NIH Strain / M-Form Trace Reads N: Pimperena Strain / S-Form Trace Reads   A. aegypti Databases » N: Liverpool Strain Genomic Supercontigs N: Liverpool Strain Transcripts, AaegL1.1 Gene Build P: Liverpool Strain Peptides, AaegL1.1 Gene Build N: Liverpool Strain Sup. Transcripts, AaegL1.1 Gene Build P: Liverpool Strain Sup. Peptides, AaegL1.1 Gene Build N: March 2008 GenBank ESTs   I. scapularis Databases » N: WIKEL Strain Genomic Supercontigs N: WIKEL Strain, June 2007 Trace Reads N: March 2008 GenBank ESTs N: WIKEL Strain, BE-01 BAC end sequences P: IscaW1.0.5 JCVI gene build peptides P: IscaW1.0.5 VB gene build peptides N: IscaW1.0.5 VB gene build transcripts N: IscaW1.0.5 JCVI gene build transcripts   C. pipiens Databases » N: Johannesburg Strain Genomic Supercontigs N: CpipJ1.1 gene build transcripts P: CpipJ1.1 gene build peptides N: March 2008 GenBank ESTs   P. humanus Databases » N: USDA Strain Genomic Supercontigs N: USDA Strain Transcripts, PhumU1.1 Gene build P: USDA Strain Peptides, PhumU1.1 gene build N: USDA Strain TIGR CDSs, PhumU1.0_5 gene build P: USDA Strain TIGR Peptides, PhumU1.0_5 Gene build N: USDA Strain VectorBase CDSs, PhumU1.0_5 gene build P: USDA Strain VectorBase Peptides, PhumU1.0_5 Gene build N: March 2008 GenBank ESTs   Other Vector Sequence Databases » N: G. morsitans March 2008 GenBank ESTs N: R. prolixus March 2008 GenBank ESTs N: L. longipalpis March 2008 GenBank ESTs N: P. papatasi March 2008 GenBank ESTs BLAST Types & Options:  Program: blastn  Nucleotide vs. Nucleotide tblastn  Peptide vs. Translated Nucleotide tblastx  Translated Nucleotide vs. Translated Nucleotide blastp  Peptide vs. Peptide blastx  Translated Nucleotide vs. Peptide  Parameters: Default [More options]  Maximum E-Value: 10 1 1E-20 1E-40 1E-60 1E-80 1E-100 Word Size: 357811153060 Scoring Matrix BLOSUM45BLOSUM62BLOSUM80PAM30PAM70 Low Complexity Masking On Off Number of Results 151050100250500 Input Query Sequence (100Kb / 10 Sequence Limit):  Upload a file:  OR  Paste in a sequence in FASTA format: Job Control:  Submit your BLAST  Retrieve a previously run BLAST job   •
	Vectorbase Last Updated May 13th, 2008  Contact Webmaster