Transcript datasets/September 2007

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Contents 1 Source 2 Release statistics 3 Major Changes 3.1 Increases 3.2 New species 3.3 Minor species

[edit] Source

All data sets were derived from the EMBL release 92. Sequence files are available as the raw submitted sequence and as a clipped file (with poly A|T tracts removed).

[edit] Release statistics

Species	Taxon ID	No. sequences	Total length (bp)
Aedes aegypti	7159	303,435	182,207,796
Anopheles gambiae	7165	216,643	133,846,784
Culex pipiens quinquefasciatus	7176	75,811	32,341,362
Ixodes scapularis	6945	10,308	5,738,900
Pediculus humanus	121224	1,137	695,554

Species	Taxon ID	No. sequences	Total length (bp)
Aedes albopictus	7160	161	140,438
Aedes spp.	n/a	1	627
Amblyomma americanum	6943	6,492	2,910,606
Amblyomma variegatum	34610	3,995	2,321,258
Anopheles albimanus	7167	4,469	2,269,065
Anopheles darlingi	43151	694	355,822
Anopheles funestus	62324	2,934	1,255,714
Anopheles spp.	n/a	83	55,789
Anopheles stephensi	30069	122	109,023
Boophilus microphilus	6941	44,234	31,085,349
Culex spp.	n/a	260	152,821
Dermacentor andersoni	34620	1,393	763,880
Dermacentor variabilis	34621	166	111,207
Glossina morsitans morsitans	37546	41,854	26,317,566
Ixodes pacificus	29930	120	49,148
Ixodes spp.	n/a	88	52,074
Lutzomyia longipalpis	7200	21,122	25,259,975
Phlebotomus papatasi	29031	19	17,836
Rhipicephalus appendiculatus	34631	19,154	14,025,131
Rhodnius prolixus	13249	1,589	1,222,103

[edit] Major Changes

[edit] Increases

• Culex 75.5K novel EST sequences
• Anopheles albimanus 4K novel EST sequences
• Boophilus microplus 1.5K new sequences

[edit] New species

New species have been added for which more than 100 sequences are present in the public nucleotide databanks.

• None

[edit] Minor species

When a species has less than 100 sequences in the public nucleotide databanks the sequences have been collated into the following groups:

• Aedes spp.
• Anopheles spp.
• Culex spp.
• Ixodes spp.