Genome datasets

From VectorBase Help System

VectorBase is responsible for the ongoing maintenance and re-annotation of a number of vector species. The data is regularly submitted to GenBank/EMBL/DDBJ. The following links give more details as to the range of species and the accessions involved.

If you have any queries then please contact us at .

Current genome assemblies
Aedes aegypti (AaegL1) - AAGE02000000 Aedes aegypti strain Liverpool, whole genome shotgun sequencing project. Supercontigs: 4,758 CH477186:CH479178 CH899794:CH902558 Contigs: 36,206 AAGE02000001:AAGE02036206
Anopheles gambiae (AgamP3) - AAAB01000000 Anopheles gambiae strain PEST, whole genome shotgun sequencing project Chromsome arms: 5 CM000356:CM000360 Contigs: 69,724 AAAB01000001:AAAB01069724
Culex quinquefasciatus (CpipJ1) - AAWU01000000 Culex quinquefasciatus strain JHB, whole genome shotgun sequencing project Supercontigs: 3,171 DS231813:DS234983 Contigs: 48,671 AAWU01000001-AAWU01048671
Ixodes scapularis (IscaW1) - ABJB010000000 Ixodes scapularis strain Wikel colony, whole genome shotgun sequencing project Supercontigs: 369,492 DS611849:DS981340 Contigs: 1,141,595 AABJB010000001-ABJB011141595
Pediculus humanus (PhumU1) - 145371558 AAZO01000000 Pediculus humanus corporis strain USDA, whole genome shotgun sequencing project Supercontigs: 1,882 DS234984-DS236865 Contigs: 8,555 AAZO01000001-AAZO01008555

Previous genome assemblies
Aedes aegypti (AaegL0) - AAGE01000000 Aedes aegypti strain Liverpool, whole genome shotgun sequencing project. Supercontigs: 37,136 CH408189:CH445324 Contigs: 655,164 AAGE01000001-AAGE01655164