Community Annotation:Feature Publication Submission Guide

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If you know of a publication that describes a gene, transcript, or protein's functional role or determination method, you can submit that publication to VectorBase. After submission, your publication will be reviewed by a VectorBase curator and once approved, will be displayed in the VectorBase GeneView Gene DAS Report.

This guide describes how to submit a publication to VectorBase.

[edit] Instructions

VectorBase User Login Page
VectorBase User Login Page
You need to be logged in to submit data to VectorBase. Go to the "User" section, enter your user name and password, and click "Log In."
A gene's gene report page
A gene's gene report page
You can associate a publication with a gene directly from a gene report page. To associate a publication with a gene, first navigate to the gene report page of the gene you're going to associate a publication with.
Inactive Community Annotation DAS Track
Inactive Community Annotation DAS Track
Scroll down to the Gene View Gene DAS Report. If the Community Annotation track is not activated, check the box and and click the Update button.
Active Community Annotation DAS Track
Active Community Annotation DAS Track
The active Community Annotation DAS Report will show all user-associated annotation for this gene. Click on the Associate a publication with this feature link to begin the publication submission process.
Publication Submission Page
Publication Submission Page
Simply enter the PubMedID (just the number) of the publication you're submitting for association and click Submit.
Publication Submission Preview
Publication Submission Preview
Publication information will be automatically fetched from NCBI and shown to you on the publication preview page. After verifying that the fetched publication information is correct, click the Yes button to confirm your submission.
Publication Submission Complete
Publication Submission Complete
After confirmation, you'll be shown a page indicating whether your publication was submitted successfully or not. If there were no problems during submission, your publication will be sent to a VectorBase curator for review.
Display of a Feature Publication
Display of a Feature Publication
When approved by a VectorBase curator, your publication will appear in the Gene View Gene DAS Report.
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